Biokemian laitos
Department of Biochemistry

Julkaisut 2009
Publications 2009

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1 Asikainen S. Small RNA-mediated Gene Regulation in Caenorhabditis elegans.
2 Carlberg C, Seuter S. A genomic perspective on vitamin D signaling.
3 Degenhardt T. An Integrated View of PPAR-Dependent Transcription.
4 Degenhardt T et al. Population-level transcription cycles derive from stochastic timing of single-cell transcription.
5 Degenhardt T et al. Peroxisome proliferator-activated receptor [alpha] controls hepatic heme biosynthesis throught ALAS1.
6 Eisold M et al. Inhibition of MAPK-signaling pathway promotes the interaction of the corepressor SMRT with the human androgen receptor and mediates repression of prostate cancer cell growth in the presence of antiandrogens.
7 Hennetin J et al. Construction and use of gene expression covariation matrix.
8 Häyrinen J et al. Proteomic analysis reveals altered energy metabolism in a transgenic mouse line with activated polyamine catabolism.
9 Kiviranta PH et al. N(epsilon)-Thioacetyl-lysine-containing tri-, tetra-, and pentapeptides as SIRT1 and SIRT2 inhibitors.
10 Laverny G. Identification of a potent and safe vitamin D receptor agonist for the treatment of inflammatory bowel disease.
11 Lehtivarjo J et al. 4D prediction of protein 1H chemical shifts.
12 Makkonen KM et al. Cell cycle regulatory effects of retinoid acid and forskolin are mediated by the Cyclin C gene.
13 Makkonen KM et al. Regulation of the hyaluronan synthase 2 gene by convergence in cyclic AMP response element-binding protein and retinoid acid receptor signaling.
14 Malinen M. Transactivation of Vitamin D Receptor Target Genes by Natural and Synthetic Ligands.
15 Paananen J, Wong G. FORG3D: Force-directed 3D graph editor for visuallization of integrated genome scale data.
16 Peräkylä M. Ligand unbinding pathways from the vitamin D receptor studied by molecular dynamics simulations.
17 Piltti J et al. Proteomics of chondrocytes with special reference to phosphorylation changes of proteins in steched human chondrosarcoma cells.
18 Pulkkinen J et al., inventor. Novel beta-hydroxyketones and beta-alkoxyketones with estrogenic activity.
19 Pulkkinen J et al., inventor. Novel 4,5-dihydroisoxazoles with estrogenic activity.
20 Rytinki MM et al. PIAS proteins: pleiotropic interactors associated with SUMO.
21 Saramäki A et al. Cyclical chromatin looping and transcription factor association on the regulatory regions of the p21 (CDKN1A) gene in response to 1[alpha],25-dihydroxyvitamin D3.
22 Turunen MP et al. Efficient regulation of VEGF expression by promoter-targeted lentiviral shRNAs based on epigenetic mechanism: a novel example of epigenetherapy.
23 Törönen P et al. Generation of gene ontology benchmark datasets with various types of positive signal.

Biokemian laitos Department of Biochemistry
Julkaisutietokanta 27.5.2010 Publications Data Base 27.5.2010